Icon Legend:
Type: course video exo open book book article git repo website
level: begin intermediate advanced
Overview
| Bayesian statistics with R O. Gimenez – A clear introduction to Bayesian analysis using R and jags |
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| Statistical Rethinking R McElreath – A complete course about Bayesian inference and regression, including covariance structure, using stan |
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| Bayesian Modeling for Socio-Environmental Data T Hobbs, M Collins, C Che-Castaldo – A course with r and jags providing an understanding to Bayesian methods, statistical concepts and methodology |
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| Bayesian statistics course F. Barraquand – A full Master course to learn Baysian statistics including MCMC, Anova, GLMM, non-linear models, occupancy models and model selection |
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| BiogecoBayes – A collection of useful workshops created by a group of researchers & students who want to progress together in their learning |
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| Bayesian Models: A Statistical Primer for Ecologists T Hobbs, M Hooten – Presents the mathematical and statistical foundations of Bayesian modeling in language accessible to non-statisticians |
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| Learning Bayesian Statistics – a podcast channel presenting scientists, their approach and thinking |
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Priors
MCMC
| The Markov-chain Monte Carlo Interactive Gallery – view algorithms |
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Convergence and Identifiability
Packages and software
JAGS
Stan
| Become a Bayesian with R & Stan M Clark – an introduction to the probabilistic programming language Stan |
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| Stan for Ecology – location for all types of works in ecology that use the software Stan for Bayesian inference |
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| Stan User Guide Stan Development Team – |
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Nimble
| nimble-training C Paciorek, D Turek, P de Valpine – several workshops to learn programming with nimble |
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| nimble manual NIMBLE Development Team – official & useful manual |
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| nimble cheatsheet |
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| nimble NIMBLE Development Team – nimble website, download, find examples and documentation |
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