Quantitative Genetics

Resources to apply quantitative genetics

maintained by : Pierre de Villemereuil Click here to contribute

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Type: course video exo open book book article git repo website

level: begin intermediate advanced

Theory in quantitative genetics

Name Links
Quantitative genetics in the wild A. Charmantier, D. Garant & L. EB Kruuk, 2014 – A very nice and approachable collection of questions tackled by evolutionary quantitative genetics to study wild populations
An ecologist’s guide to the animal model Wilson, A. J., D. Reale, M. N. Clements, M. M. Morrissey, E. Postma, C. A. Walling, L. E. B. Kruuk, and D. H. Nussey., 2011 – A very thorough paper on the various subtelties of animal models and how to use them to study wild populations
Quantitative Genetics B. Walsh, 2016 – A series of online videos of lectures on evolutionary quantitative genetics, tackling the bases, selection, QTL mapping and many other topics
Genetics and analysis of quantitative traits M. Lynch & B. Walsh, 1998 – A thorough and in-depth textbook introducing the main concepts of quantitative genetics
Evolution and selection of quantitative traits B. Walsh & M. Lynch, 2018 – A more recent update, and extremely thorough textbook on the evolutionary aspects of quantitative genetics

Statistical models

Name Links
Estimation of a biological trait heritability using the animal model and MCMCglmm P. de Villemereuil, 2021 – A hands-on tutorial on performing quantitative genetics using a Bayesian method
Quantitative genetics using the sommer package Giovanny Covarrubias-Pazaran, 2022 – A guide on how to use the sommer package to perform quantitative genetics
Wild animal model wiki M. Clements, M. Morrissey, A. Wilson, E. Postma, D. Nussey & A. Husby, 2011 – A wiki on diverse packages to implement quantitative genetics models. The website is not maintained and contains a few errors, but contains useful “starter code” for some packages.